NOTE: See the UTK/UTIA Biosafety website for the most up-to-date biosafety guidance. The development of the dedicated Biosafety Officer and Biosafety website relegates the information in this chapter to background information.
11.0 BIOLOGICAL SAFETY
The following sections provide general guidelines and requirements for biological safety. This chapter covers the following topics:
11.2 Biosafety Principle
The primary principle of biological safety (i.e., biosafety) is containment. The term containment refers to a series of safe methods for managing infectious agents in the laboratory. The purpose of containment is to reduce or eliminate human and environmental exposure to potentially harmful agents. (For more information on the CDC guidelines for containment - please see Primary Containment for Biohazards: Selection, Installation, and Use of Biological Safety Cabinets, Sept. 1995. http://www.cdc.gov/od/ohs/biosfty/bsc/bsc.htm
11.2.1 Primary and Secondary Containment
There are two levels of biological containment---primary and secondary. Primary containment protects people and the immediate laboratory environment from exposure to infectious agents. Good microbial techniques and safety equipment provide sufficient primary containment. Examples of primary containment include safety equipment such as biological safety cabinets, enclosed containers, and safety centrifuge cups. Occasionally, when it is impractical to work in biological safety cabinets, personal protective equipment, such as lab coats and gloves may act as the primary barrier between personnel and infectious materials.
Secondary containment protects the environment external to the laboratory from exposure to infectious materials. Good facility design and operational practices provide secondary containment. Examples of secondary containment include work areas that are separate from public areas, decontamination facilities, hand washing facilities, special ventilation systems, and air locks.
11.2.2 Elements of Containment
Ultimately, the three key elements of biological containment are laboratory practices, safety equipment, and facility design. To ensure minimal exposure, employees must assess the hazards associated with their work and determine how to apply the biosafety principle appropriately.
IMPORTANT: Employees working with infectious agents or potentially infectious materials must be aware of the hazards associated with their work. These workers must be trained (with corresponding documentation) and proficient in biosafety procedures and techniques.
11.3 General Biosafety Guidelines
Biohazardous materials require special safety precautions and procedures. Follow these guidelines when working with infectious agents:
11.3.1 Personal Hygiene Guidelines
- Wash your hands thoroughly, as indicated below:
- after working with any biohazard
- after removing gloves, laboratory coat, and other contaminated protective clothing
- before leaving the laboratory area
- Do not touch your face when handling biological material.
- Never eat, drink, smoke, or apply cosmetics in the work area.
11.3.2 Clothing Guidelines
- Always wear a wrap-around gown or scrub suit, gloves, and a surgical mask when working with infectious agents or infected animals.
- Wear gloves over gown cuffs.
- 3Never wear contact lenses around infectious agents.
- Do not wear potentially contaminated clothing outside the laboratory area.
- To remove contaminated clothing, follow these steps:
- Remove booties from the back.
- Remove head covering from the peak.
- Untie gown while wearing gloves.
- Remove gloves by peeling them from the inside out.
- Remove the gown by slipping your finger under the sleeve cuff of the gown.
11.3.3 Handling Procedures
- Use mechanical pipetting devices.
- Minimize aerosol production.
- Add disinfectant to water baths for infectious substances.
- Use trunnion cups with screw caps for centrifuging procedures. Inspect the tubes before each use.
- Use secondary leak-proof containers when transporting samples, cultures, inoculated petri dishes, and other containers of biohazardous materials.
Avoid using syringes and needles whenever possible. If a syringe is necessary, minimize your chances of exposure by following these guidelines:
- Use a needle-locking or disposable needle unit.
- Take care not to stick yourself with a used needle.
- Do not place used syringes in pans containing pipets or other glassware that require sorting.
- Do not recap used needles.
- Dispose of needles in an approved sharps container.
11.3.5 Work Area
- Keep laboratory doors shut when experiments are in progress.
- Limit access to laboratory areas when experiments involve biohazardous agents.
- Ensure that warning signs are posted on laboratory doors. These signs should include the universal biohazard symbol and the emergency information for the laboratory.
- Ensure that vacuum lines have a suitable filter trap.
- Decontaminate work surfaces daily and after each spill.
- Decontaminate all potentially contaminated equipment.
- Transport contaminated materials in leak-proof containers.
- Keep miscellaneous material (i.e., books, journals, etc.) away from contaminated areas.
- Completely decontaminate equipment before having maintenance or repair work done.
11.3.6 Universal Precautions
Clinical and diagnostic laboratories often handle specimens without full knowledge of the material's diagnosis; these specimens may contain infectious agents. To minimize exposure, observe universal precautions when handling all biological specimens.
11.4 CDC and NIH Biosafety Levels
The Centers for Disease Control (CDC) and the National Institutes of Health (NIH). have established four biosafety levels consisting of recommended laboratory practices, safety equipment, and facilities for various types of infectious agents. Each biosafety level takes into account operations to be performed, known and suspected routes of transmission, and laboratory functions.
11.4.1 Biosafety Level 1
Biosafety Level 1 precautions are appropriate for facilities that work with defined and characterized strains of viable organisms that do not cause disease in healthy adult humans (e.g., Bacillus subtilis and Naegleria gruberi). Level 1 precautions rely on standard microbial practices without special primary or secondary barriers. Biosafety Level 1 criteria are suitable for undergraduate and secondary education laboratories.
11.4.2 Biosafety Level 2
Biosafety Level 2 precautions are appropriate for facilities that work with a broad range of indigenous moderate-risk agents known to cause human disease (e.g., Hepatitis B virus, salmonellae, and Toxoplasma spp.). Level 2 precautions are necessary when working with human blood, body fluids, or tissues where the presence of an infectious agent is unknown. The primary hazards associated with Level 2 agents are injection and ingestion. Most UTIA research laboratories should comply with Biosafety Level 2 criteria.
11.4.3 Biosafety Level 3
Biosafety Level 3 precautions apply to facilities that work with indigenous or exotic agents with the potential for aerosol transmission and lethal infections (e.g.,Mycobacterium tuberculosis). The primary hazards associated with Level 3 agents are auto-inoculation, ingestion, and inhalation. Level 3 precautions emphasize primary and secondary barriers. For primary protection, all laboratory manipulations should be performed in a biological safety cabinet or other enclosed equipment. Secondary protection should include controlled access to the laboratory and a specialized ventilation system.
11.4.4 Biosafety Level 4
Biosafety Level 4 precautions are essential for facilities that work with dangerous and exotic agents with a high risk of causing life-threatening disease, the possibility of aerosol transmission, and no known vaccine or therapy (e.g., Marburg or Congo-Crimean viruses). Level 4 agents require complete isolation. Class III biological safety cabinets or full-body air-supplied positive-pressure safety suits are necessary when working with Level 4 agents. In addition, isolated facilities, specialized ventilation and waste management systems are required. There are no Biosafety Level 4 facilities at the University of TN.
11.4.5 Animal Biosafety
Four biosafety levels are also described for infectious disease work with laboratory animals. Safety practices, equipment, and facilities are designated by Animal Biosafety Levels 1, 2, 3, and 4.
A copy of the CDC/NIH criteria for laboratory and animal biosafety levels is available online at http://www.orcbs.msu.edu/biological/biolsaf.htm.
11.5 Recombinant DNA Research
As an institute that receives NIH funding, UTIA is obligated to ensure that all recombinant DNA (rDNA) work conducted by its faculty and staff conforms with Federal rDNA guidelines (http://grants.nih.gov/grants/policy/recombinentdnaguidelines.htm). This task falls to the Institutional Biosafety Committee (IBC). The IBC reviews all protocols involving rDNA, rules on the appropriateness of proposed containment procedures, and sets suitable biosafety levels.
The Federal rDNA guidelines define rDNA as " . . . molecules which are constructed outside of living cells by joining natural or synthetic DNA segments to DNA molecules that can replicate in a living cell." The Federal definition also includes the replicated progeny of these molecules as well as cells, plants and animals that harbor such molecules. Transgenic plants and animals also come under the guidelines, even if the transgenic DNA was not cloned prior to introduction.
Investigators who possess rDNA in any form must file an rDNA protocol with the IBC.
11.6 Disinfection and Sterilization
Biological safety depends on proper cleanup and removal of potentially harmful agents. Disinfection and sterilization are two ways to help ensure biological safety in the laboratory. Disinfection is defined as reduction of the number of pathogenic organisms by the direct application of physical or chemical agents. Sterilization is defined as total destruction of all living organisms.
The following sections discuss guidelines and procedures for biological disinfection and sterilization.
11.6.1 General Guidelines
Choosing the best method for disinfection and sterilization is very important. The proper method depends on the following: target organisms to be removed and characteristics of the area to be cleaned.
Once you have chosen the proper method for disinfection or sterilization, follow these guidelines to ensure laboratory safety:
- Frequently disinfect all floors, cabinet tops, and equipment where biohazardous materials are used.
- Use autoclavable or disposable materials whenever possible. Keep reusable and disposable items separate.
- Minimize the amount of materials and equipment present when working with infectious agents.
- Sterilize or properly store all biohazardous materials at the end of each day.
- Remember that some materials may interfere with chemical disinfectants---use higher concentrations or longer contact time.
- Use indicators with autoclave loads to ensure sterilization.
- Clearly mark all containers for biological materials (e.g., BIOHAZARDOUS - TO BE AUTOCLAVED).
11.6.2 Types of Disinfectant - Use the following table to aid in the selection of disinfectants.
||Ethyl or isopropyl alcohol at 70-80% concentration is a good general purpose disinfectant; not effective against bacterial spores.
||Effective against vegetative bacteria, fungi, and viruses containing lipids;unpleasant odor.
||Concentration of 5-8% formalin is a good disinfectant against vegetative bacteria, spores, and viruses; known carcinogen; irritating odor.
|Cationic detergents are strongly surface active; extremely effective against lipoviruses; ineffective against bacterial spores; may be neutralized by anionic detergents (i.e., soaps).
|Low concentrations (50-550 ppm) are active against vegetative bacteria and most viruses; higher concentrations (2,500 ppm) are required for bacterial spores; corrosive to metal surfaces; must be prepared fresh; laundry bleach (5.25% chlorine) may be diluted and used as a disinfectant.
|Recommended for general use; effective against vegetative bacteria and viruses; less effective against bacterial spores;
11.6.3 Sterilization Methods
There are three common methods for sterilizing laboratory materials: wet heat, dry heat, and ethylene oxide gas.
18.104.22.168 Wet Heat
When used properly, the damp steam heat from an autoclave effectively sterilizes biohazardous waste. Sterilization occurs when contaminated materials reach 15 psi pressure at 250F or 121C for at least 30 minutes.
IMPORTANT: For the autoclave process to be effective, sufficient temperature, time, and direct steam contact are essential.
Every UTIA department that autoclaves biohazardous waste should have written documentation to ensure the waste is sterile. Parameters for sterilization and standard operating procedures should include requirements for verifying sterilization.
Potential problems with wet heat sterilization and autoclaves include the following:
- Heavy or dense loads require higher temperature for sterilization.
- Poor heat conductors (e.g., plastic) take longer to sterilize.
- Containers may prevent steam from reaching the materials to be sterilized.
- Incomplete air removal from the chamber can prevent contact between the steam and the load.
- Deep trays can interfere with air removal.
- Tightly stacked loads can impede steam circulation and air removal.
- Double-bagging will impede steam penetration.
- Carcasses do not allow steam penetration.
7. Some bags and containers rated as autoclavable have thermal stability , but they do not allow steam penetration.
To ensure that all materials are sterile, always test autoclave loads. Remember, however, that some sterilization indicators are incomplete. Autoclave tape, for example, verifies sufficient external temperature exposure, but it does not indicate internal equipment temperature, exposure time, or steam penetration. Thermocouples or other instrumentation can also indicate temperature, but they do not verify sterility. A biological indicator is the most effective monitor to ensure sterility. Commercially available strips or vials of Bacillus species endospores, for example, are suitable biological indicators.
22.214.171.124 DRY HEAT
Dry heat is less effective than wet heat for sterilizing biohazardous materials. Dry heat requires more time (two to four hours) and a higher temperature (320-338F or 160- 170C) to achieve sterilization. A Bacillus species biological indicator can verify dry heat sterilization.
126.96.36.199 ETHYLENE OXIDE GAS
Ethylene oxide gas is lethal to all microorganisms. Because it is also a known carcinogen and potentially explosive (Freon and carbon dioxide mixtures are stable), minimize your exposure and use extreme care when working with this gas. Ethylene oxide sterilizers and aerators must be properly vented. Ethylene oxide gas is most effective with heat-resistant organisms and heat sensitive equipment. The effectiveness of ethylene oxide gas may be affected by the following:
Temperature: The antimicrobial activity of ethylene oxide increases with increased temperature. Normal sterilization temperature is 120- 140F or 49-60C.
Ethylene Oxide Concentration: Sterilization time decreases with increased gas concentration. Normal concentration is 500-1000 mg/L.
Humidity: Relative humidity of 30-60% is necessary.
Exposure Time: Follow the manufacturer's recommendations.
11.7 Biological Safety Cabinets
A biological safety cabinet is a primary barrier against biohazardous or infectious agents. Although biological safety cabinets surround the immediate work space involving an agent, they do not provide complete containment (i.e., aerosols can escape). Therefore, careful work practices are essential when working with agents that require a biological safety cabinet.
NOTE: A biological safety cabinet is often referred to by other names such as: biohood, tissue culture hood, or biological fume hood.
All biological safety cabinets contain at least one High Efficiency Particulate Air (HEPA) filter. These cabinets operate with a laminar air flow (i.e., the air flows with uniform velocity, in one direction, along parallel flow lines).
Biological safety cabinets must be inspected and certified:
- when newly installed
- after filter or motor replacement
- after being moved
Inspections of biosafety cabinets are contracted by the laboratory. They are not performed by UT employees. Contact the Safety Office for more information about inspections.
The following sections discuss safety procedures and guidelines for working with various types of biological safety cabinets:
11.7.1 Types of Cabinets
|Type of Cabinet
||Operation and Use
|Only exhaust air is filtered. The user and environment are protected but the experiment is not. Operator's hands and arms may be exposed to hazardous materials inside the cabinet. This cabinet may be used with low to moderate-risk biological agents.
||Vertical laminar air flow with filtered supply and exhaust air. The user, product, and environment are protected.
| Type A
||Recirculates 70% of the air inside the cabinet. Do not use with flammable, radioactive, carcinogenic, or high-risk biological agents.
|Recirculates 30% of the air inside the cabinet and exhausts the rest to the outside. May be used with low to moderate-risk agents and small amounts of chemical carcinogens or volatiles.
| Type B2
||Offers total exhaust with no recirculation.
| Type B3
||Same as Class II Type A, but vented to the outside of the building.
or Glove Box
|Gas-tight and maintained under negative air pressure. Used to work with highly infectious, carcinogenic, or hazardous materials. All operations are conducted through rubber gloves attached to entry portals.
11.7.2 Using Biological Safety Cabinets
Follow these guidelines for using biological safety cabinets properly:
- Leave safety cabinets on at all times. Otherwise, turn the blower on and purge the air for at least five minutes before beginning work.
- Never turn off the blower of a biological safety cabinet that is vented to the outside.
- Turn off the UV light if it is on. Never work in a unit with the UV light illuminated. (UV light will damage your eyes.)
- Do not depend on the UV germicidal lamp to provide a sterile work surface; wipe down the surface with a disinfectant (70% alcohol is usually suitable).
NOTE: For more information on ultraviolet lights, refer to the Radiation Safety chapter.
- Conduct work at least four inches from the glass view panel. The middle third area is ideal.
- Limit arm movement and avoid motions that could disturb airflow.
- If a burner is necessary, remember that flames cause air turbulence: place burners to the rear of the work space.
- Never use flammable solvents in a biological safety cabinet unless it is a total-exhaust cabinet (e.g., Class II B2).
11.7.3 Experiment Completion:
- Enclose or decontaminate all equipment that has been in direct contact with the infectious agent.
- Cover all waste containers.
- To purge airborne contaminants from the work area, allow the cabinet to operate for five minutes with no activity inside the cabinet.
- Remove all equipment from the cabinet.
- Decontaminate interior work surfaces.
IMPORTANT: Biological safety cabinets are not a substitute for good laboratory practices. Because aerosols can escape, take precautions to minimize aerosol production and to protect yourself from contamination.
11.8 Clean Benches/Laminar Flow Hoods
A clean bench has horizontal laminar air flow. The HEPA-filtered air flows across the work surface towards the operator, providing protection for the product, but no protection for the user. Because clean benches offer no protection, use a clean bench only to prepare sterile media. Donot use clean benches when working with pathogenic organisms, biological materials, chemicals, or radioactive materials.
11.9 Importing and Shipping Biological Materials
The Public Health Service provides Foreign Quarantine regulations for importing etiologic agents and human disease vectors. Other regulations for packaging, labeling, and shipping are administered jointly by the Public Health Service and the Department of Transportation. The U.S. Department of Agriculture regulates the importation and shipment of animal pathogens. It prohibits the importation, possession, and use of certain animal disease agents that pose a serious threat to domestic livestock and poultry.
Note: Biological specimens are exempt from conforming to the DOT shipping regulations.
11.10 Biological Spill Response
The exact procedure for responding to a biological spill depends on the material, amount, and location of the spill. In general, follow these steps immediately after a biological spill occurs:
- Warn others
- Leave the room; close the door
- Remove contaminated garments
- Wash your hands
- Notify your supervisor
Then, follow these steps to clean up a biological spill:
- Wait for any aerosols to settle
- Put on protective clothing, as appropriate
- Apply disinfectant to the contaminated area
- Cover the area with paper towels to absorb the disinfectant
- Wipe up the towels and mop the floor
- Autoclave all contaminated wastes
NOTE: Spill cleanup must be appropriate for the hazards involved. Call the Safety Office or, if the spilled material is radioactive, call the Office of Radiation Safety for assistance.
If a spill occurs inside a biological safety cabinet, follow these steps:
- Decontaminate materials while the cabinet is operating to prevent contaminants from escaping.
- Spray or wipe all affected equipment with an appropriate disinfectant. (Wear gloves while doing this.)
- If the spill is large, flood the work surface with disinfectant and allow it to stand for 10 to 15 minutes before removing it.
11.11 Biological Waste Disposal
The Tennessee Department of Health (TDH) regulates the disposal of biohazardous waste. Waste that contains infectious materials and waste that may be harmful to humans, animals, plants or the environment is considered biohazardous. Examples of biohazardous waste include the following.
- Waste from infectious animals
- Bulk human blood or blood products
- Microbiological waste (including pathogen-contaminated disposable culture dishes, and disposable devices used to transfer, inoculate and mix pathogenic cultures)
- Pathological waste
- Hazardous rDNA and genetic manipulation products
Biohazardous waste mixed with hazardous chemical or radioactive waste must be treated to eliminate the biohazard prior to disposal. After treatment, manage the hazardous waste through the Office of Radiation Safety or through the UTIA Safety Office.
The following sections offer general safety guidelines and procedures for disposing of biological waste.
11.11.1 Handling and Transport
Follow these guidelines for handling and transporting biohazardous waste.
1. Properly trained personnel (not the custodial staff) are responsible for transporting untreated biological waste to the holding area.
- Avoid transporting untreated biohazardous materials and foul or visually offensive materials through non-laboratory areas.
11.11.2 Labeling Biohazardous Waste
Follow these guidelines for labeling biohazardous waste.
- Clearly label each container of untreated biohazardous waste and mark it with the Biohazard Symbol.
- Label autoclave bags with special tape that produces the word, "AUTOCLAVED," upon adequate thermal treatment. Apply this tape across the Biohazard Symbol before autoclaving the bag.
- Label all containers for sharps as "ENCAPSULATED SHARPS."
11.11.3 Disposal Methods
Different materials require different disposal methods to ensure safety. Follow these guidelines for physically disposing of biological waste:
- Animal Carcasses and Body Parts. Incinerate the materials or send them to a commercial rendering plant for disposal.
- Solid Animal Waste. All animal waste and bedding that is infectious or harmful to humans, animals or the environment, should be treated by incineration, thermal disinfection or chemical disinfection.
- Liquid Waste. Liquid waste, including bulk blood and blood products, cultures and stocks of etiological agents and viruses, cell culture material and rDNA products should be disinfected by thermal or chemical treatment and then discharged into the sanitary sewer system.
- Metal Sharps. All materials that could cause cuts or punctures must be contained, encapsulated and disposed of in a manner that does not endanger other workers. Needles and syringes are to be disposed of as biohazardous waste even if they are sterile, capped and in the original packaging (this prevents problems arising from needles in the regular trash).
- Pasteur Pipets and Broken Glassware. Place in a rigid, puncture resistant container. Disinfect by thermal or chemical treatment, if contaminated. Label the container as, "Broken Glass," and place it in a dumpster.
11.11.4 Nonhazardous Biological Waste
Most biological waste that is not infectious or otherwise hazardous to humans, animals, plants, or the environment may be discarded as regular waste or sewage. The only exceptions are animal carcasses and body parts. These wastes must be incinerated or sent to a commercial rendering plant for treatment. In addition, there are no record keeping requirements for nonhazardous biological waste.
Follow these guidelines for nonhazardous biological waste:
- It is recommended to autoclave or disinfect all microbial products, even if they are not biohazardous.
- Avoid disposing of waste in a manner that could cause visual or odorous problems.
- Do not label nonhazardous biological waste as hazardous (e.g., do not use the Biohazard Symbol, red bags, etc.). Instead, it is recommended to label the container as "NONHAZARDOUS BIOLOGICAL WASTE."
- Use nonhazardous animal bedding and manure for compost or fertilizer when possible.
Note: Only use Biohazard bags (red bags) for disposal of biohazardous materials, NEVER for chemical waste or spill materials.